Pir_g06446

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g06446

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00164800	evm_27.TU.AmTr_v1...	Polyamine metabolism.putrescine.synthesis.cytosolic...	0.03	OrthoFinder output from all 47 species
Ala_g02589	SAMDC	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_19970	No alias	S-adenosyl methionine decarboxylase	0.03	OrthoFinder output from all 47 species
LOC_Os09g37120.1	LOC_Os09g37120	ornithine decarboxylase	0.03	OrthoFinder output from all 47 species
Lfl_g23603	SAMDC	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g07578	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g07560	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g18523	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g22755	SAMDC	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	Interproscan
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	biogenic amine biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	41	373

External Links

No external refs found!

Pir_g06446

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation