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  5. Pir_g06118

Pir_g06118 (SLT1)


Aliases : SLT1

Description : not classified & original description: none


Gene families : OG0001229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g06118

Target Alias Description ECC score Gene Family Method Actions
Als_g03137 SLT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19312.t1 SLT1, Aspi01Gene19312 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67280.t1 SLT1, Aspi01Gene67280 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.19G076900.1 SLT1, Ceric.19G076900 not classified & original description: pacid=50576658... 0.02 OrthoFinder output from all 47 species
Dac_g05494 SLT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31606 SLT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24961 SLT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10302 SLT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21848 SLT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!