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Pir_g03376 (PSBD)


Aliases : PSBD

Description : component *(PsbD/D2) of PS-II reaction center complex & original description: none


Gene families : OG0001107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g03376
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
Dde_g15702 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.04 OrthoFinder output from all 47 species
Ehy_g01124 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01010924001 PSBD Photosystem II D2 protein OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Nbi_g40674 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.07 OrthoFinder output from all 47 species
Ppi_g01211 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.04 OrthoFinder output from all 47 species
Solyc00g230080.1.1 PSBD, Solyc00g230080 Photosystem II D2 protein OS=Tupiella akineta... 0.04 OrthoFinder output from all 47 species
Tin_g01230 PSBD component *(PsbD/D2) of PS-II reaction center complex &... 0.04 OrthoFinder output from all 47 species
Tin_g12149 PSBA component *(PsbA/D1) of PS-II reaction center complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA Interproscan
BP GO:0019684 photosynthesis, light reaction IEA Interproscan
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 31 320
No external refs found!