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  5. Pir_g01667

Pir_g01667 (ATB' GAMMA)


Aliases : ATB' GAMMA

Description : regulatory component B1 of PP2A phosphatase complexes & original description: none


Gene families : OG0000345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01667

Target Alias Description ECC score Gene Family Method Actions
AT3G09880 ATB' BETA Protein phosphatase 2A regulatory B subunit family protein 0.02 OrthoFinder output from all 47 species
AT5G25510 No alias Protein phosphatase 2A regulatory B subunit family protein 0.02 OrthoFinder output from all 47 species
Als_g31798 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45714.t1 ATB' BETA,... regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64931.t1 ATB' BETA,... regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
LOC_Os04g40860.1 LOC_Os04g40860 regulatory component B1 of PP2A phosphatase complexes 0.02 OrthoFinder output from all 47 species
LOC_Os08g02860.1 ATB' GAMMA,... regulatory component B1 of PP2A phosphatase complexes 0.02 OrthoFinder output from all 47 species
Lfl_g04771 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
MA_10435708g0010 ATB' GAMMA regulatory component B1 of PP2A phosphatase complexes 0.03 OrthoFinder output from all 47 species
Ppi_g06898 ATB' GAMMA regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Spa_g05233 ATB' BETA regulatory component B1 of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Zm00001e005143_P001 ATB' BETA, Zm00001e005143 regulatory component B1 of PP2A phosphatase complexes 0.01 OrthoFinder output from all 47 species
Zm00001e029240_P001 ATB' GAMMA,... regulatory component B1 of PP2A phosphatase complexes 0.02 OrthoFinder output from all 47 species
Zm00001e032358_P001 Zm00001e032358 regulatory component B1 of PP2A phosphatase complexes 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0019888 protein phosphatase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004535 poly(A)-specific ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002554 PP2A_B56 93 504
No external refs found!