Pir_g01184

Description : not classified & original description: none

Gene families : OG0006741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006741_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g01184

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00074520	evm_27.TU.AmTr_v1...	PsbP domain-containing protein 4, chloroplastic...	0.06	OrthoFinder output from all 47 species
AT1G77090	No alias	Mog1/PsbP/DUF1795-like photosystem II reaction center...	0.03	OrthoFinder output from all 47 species
Aev_g31777	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Ala_g01112	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Als_g12599	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g01125	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08421	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene57620.t1	Aspi01Gene57620	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g10334	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Ceric.35G021700.1	Ceric.35G021700	not classified & original description: pacid=50580848...	0.08	OrthoFinder output from all 47 species
Cre03.g198950	No alias	PsbP domain-containing protein 4, chloroplastic...	0.01	OrthoFinder output from all 47 species
Dac_g00401	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g14466	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g04309	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01010018001	No alias	PsbP domain-containing protein 4, chloroplastic...	0.03	OrthoFinder output from all 47 species
LOC_Os12g08830.1	LOC_Os12g08830	PsbP domain-containing protein 4, chloroplastic...	0.06	OrthoFinder output from all 47 species
Len_g04660	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g35597	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10428945g0010	No alias	PsbP domain-containing protein 4, chloroplastic...	0.02	OrthoFinder output from all 47 species
Msp_g02718	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26017	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g05874	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g07734	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g064670.3.1	Solyc04g064670	PsbP domain-containing protein 4, chloroplastic...	0.04	OrthoFinder output from all 47 species
Spa_g19157	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g03853	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0019898	extrinsic component of membrane	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
CC	GO:0009512	cytochrome b6f complex	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002683	PsbP_C	99	242

External Links

No external refs found!

Pir_g01184

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation