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  5. Pir_g00293

Pir_g00293 (PBB2)


Aliases : PBB2

Description : beta-type-2 component *(PBB) of 26S proteasome & original description: none


Gene families : OG0004022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g00293

Target Alias Description ECC score Gene Family Method Actions
Cba_g14020 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cre10.g424400 PBB1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
GSVIVT01000574001 PBB2 Protein degradation.26S proteasome.20S core... 0.01 OrthoFinder output from all 47 species
LOC_Os05g09490.1 PBB1, LOC_Os05g09490 component beta type-2 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Len_g01148 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Msp_g07522 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ore_g11104 PBB1 beta-type-2 component *(PBB) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Ppi_g08876 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Sam_g38226 No alias beta-type-2 component *(PBB) of 26S proteasome &... 0.01 OrthoFinder output from all 47 species
Solyc04g024420.3.1 PBB2, Solyc04g024420 component beta type-2 of 26S proteasome 0.01 OrthoFinder output from all 47 species
Zm00001e029814_P002 PBB1, Zm00001e029814 component beta type-2 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 34 214
No external refs found!