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  5. Len_g57821

Len_g57821 (Rap2.6L)


Aliases : Rap2.6L

Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g57821
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00135920 HRE2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00148470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00185480 ERF-1, ATERF-1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00044590 DREB2A, DREB2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.02 OrthoFinder output from all 47 species
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.04 OrthoFinder output from all 47 species
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G44210 ATERF-9, ERF9, ATERF9 erf domain protein 9 0.02 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g04104 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g10286 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g10396 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g13220 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27693 ORA47 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55284 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26601 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g26411 RAP2.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38332 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g38999 ORA47 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05425.t1 ORA47, Aspi01Gene05425 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34452.t1 DEAR2, Aspi01Gene34452 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53875.t1 DEAR4, RAP2.10,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61392.t1 DREB26, Aspi01Gene61392 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058707 No alias subgroup ERF-X transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G096400.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.10G058000.1 ORA47, Ceric.10G058000 not classified & original description: pacid=50613486... 0.03 OrthoFinder output from all 47 species
Dcu_g07398 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26298 ATERF3, ERF3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013916001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01034563001 ERF110 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_11856 HRE2 Ethylene-responsive transcription factor RAP2-3... 0.01 OrthoFinder output from all 47 species
LOC_Os04g46240.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46250.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g03670.1 DREB1A, ATCBF3,... transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
LOC_Os09g39810.1 LOC_Os09g39810 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g39850.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39330.1 RAP2.11, LOC_Os12g39330 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Len_g36618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g20776 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_4032g0010 ATERF3, ERF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_78784g0010 ATERF3, ERF3 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_8574268g0010 TINY2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Nbi_g03481 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo38494 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Solyc01g108240.3.1 RRTF1, Solyc01g108240 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc02g090790.1.1 RRTF1, Solyc02g090790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g118190.4.1 Solyc03g118190 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc04g050750.2.1 Solyc04g050750 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g051840.1.1 CRF4, Solyc06g051840 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g065820.3.1 Solyc06g065820 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g082590.1.1 CRF4, Solyc06g082590 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g050970.1.1 RRTF1, Solyc10g050970 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc10g076380.2.1 DREB19, Solyc10g076380 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc12g056590.2.1 ERF110, Solyc12g056590 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g07893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08163 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g56350 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Tin_g21202 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015429_P001 Zm00001e015429 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e015430_P001 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.02 OrthoFinder output from all 47 species
Zm00001e016064_P001 RAP2.2, Zm00001e016064 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e025840_P001 DREB2A, DREB2,... transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Zm00001e035811_P001 PUCHI, Zm00001e035811 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e041533_P001 ERF38, ATERF38,... transcription factor (DREB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 303 352
No external refs found!