Len_g48952


Description : not classified & original description: none


Gene families : OG0000464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g48952

Target Alias Description ECC score Gene Family Method Actions
Aev_g01235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49499.t1 Aspi01Gene49499 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G061800.1 Ceric.36G061800 not classified & original description: pacid=50567933... 0.03 OrthoFinder output from all 47 species
Len_g04672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20136 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g00994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g008480.3.1 Solyc10g008480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g22808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008507 DUF789 10 329
No external refs found!