Len_g48730

Description : metabolite transporter *(DTX) & original description: none

Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g48730

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00229640	evm_27.TU.AmTr_v1...	Solute transport.carrier-mediated transport.MOP...	0.03	OrthoFinder output from all 47 species
AT1G12950	RSH2	root hair specific 2	0.02	OrthoFinder output from all 47 species
AT1G15170	No alias	MATE efflux family protein	0.02	OrthoFinder output from all 47 species
AT1G47530	No alias	MATE efflux family protein	0.02	OrthoFinder output from all 47 species
AT1G61890	No alias	MATE efflux family protein	0.02	OrthoFinder output from all 47 species
AT3G23550	No alias	MATE efflux family protein	0.02	OrthoFinder output from all 47 species
AT4G21903	No alias	MATE efflux family protein	0.03	OrthoFinder output from all 47 species
AT5G44050	No alias	MATE efflux family protein	0.02	OrthoFinder output from all 47 species
AT5G65380	No alias	MATE efflux family protein	0.02	OrthoFinder output from all 47 species
Azfi_s0002.g001600	No alias	metabolite transporter *(DTX) & original description: CDS=1-642	0.04	OrthoFinder output from all 47 species
Azfi_s0014.g013450	No alias	metabolite transporter *(DTX) & original description: CDS=77-1441	0.04	OrthoFinder output from all 47 species
Ceric.28G031400.1	Ceric.28G031400	metabolite transporter *(DTX) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.28G041500.1	Ceric.28G041500	metabolite transporter *(DTX) & original description:...	0.03	OrthoFinder output from all 47 species
Cre12.g523250	No alias	Solute transport.carrier-mediated transport.MOP...	0.02	OrthoFinder output from all 47 species
GSVIVT01004076001	No alias	Solute transport.carrier-mediated transport.MOP...	0.02	OrthoFinder output from all 47 species
GSVIVT01012737001	No alias	Solute transport.carrier-mediated transport.MOP...	0.03	OrthoFinder output from all 47 species
Gb_00281	No alias	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
Gb_04739	No alias	metabolite transporter (DTX)	0.04	OrthoFinder output from all 47 species
LOC_Os03g08900.1	LOC_Os03g08900	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species
LOC_Os03g37490.1	LOC_Os03g37490	metabolite transporter (DTX)	0.04	OrthoFinder output from all 47 species
LOC_Os05g48040.1	LOC_Os05g48040	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species
LOC_Os07g33310.1	LOC_Os07g33310	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
LOC_Os08g37432.1	LOC_Os08g37432	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
MA_10434642g0010	No alias	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species
MA_9267g0020	No alias	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
Mp3g05110.1	No alias	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species
Pir_g61420	No alias	metabolite transporter *(DTX) & original description: none	0.05	OrthoFinder output from all 47 species
Solyc10g007360.4.1	Solyc10g007360	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species
Zm00001e005085_P001	Zm00001e005085	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species
Zm00001e012499_P001	Zm00001e012499	metabolite transporter (DTX)	0.03	OrthoFinder output from all 47 species
Zm00001e014159_P001	Zm00001e014159	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species
Zm00001e035104_P001	Zm00001e035104	metabolite transporter (DTX)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005047	signal recognition particle binding	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	HCCA
BP	GO:0031144	proteasome localization	IEP	HCCA
BP	GO:0031503	protein-containing complex localization	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0071630	nuclear protein quality control by the ubiquitin-proteasome system	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002528	MATE_fam	2	158

External Links

No external refs found!

Len_g48730

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation