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  5. Len_g40204

Len_g40204 (ECR1)


Aliases : ECR1

Description : large subunit *(ECR1) of E1 RUB ubiquitin-activating enzyme complex & original description: none


Gene families : OG0005637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g40204

Target Alias Description ECC score Gene Family Method Actions
Aob_g14452 ECR1 large subunit *(ECR1) of E1 RUB ubiquitin-activating... 0.03 OrthoFinder output from all 47 species
Azfi_s0421.g069168 ECR1 large subunit *(ECR1) of E1 RUB ubiquitin-activating... 0.02 OrthoFinder output from all 47 species
Cre12.g491500 ECR1 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os01g16540.1 ECR1, LOC_Os01g16540 large component ECR1 of RUB activating E1 complex 0.03 OrthoFinder output from all 47 species
Solyc01g079840.3.1 ECR1, Solyc01g079840 large component ECR1 of RUB activating E1 complex 0.02 OrthoFinder output from all 47 species
Zm00001e025502_P002 ECR1, Zm00001e025502 large component ECR1 of RUB activating E1 complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0019781 NEDD8 activating enzyme activity IEA Interproscan
BP GO:0045116 protein neddylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR014929 E2-binding 352 436
IPR000594 ThiF_NAD_FAD-bd 38 328
No external refs found!