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  5. Len_g30102

Len_g30102


Description : not classified & original description: none


Gene families : OG0002444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30102
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Adi_g004474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056152 No alias regulatory protein *(VQ) of WRKY activity & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46256.t1 Aspi01Gene46256 regulatory protein *(VQ) of WRKY activity & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46543.t1 Aspi01Gene46543 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G039800.1 Ceric.05G039800 not classified & original description: pacid=50578038... 0.04 OrthoFinder output from all 47 species
Ceric.1Z108800.1 Ceric.1Z108800 not classified & original description: pacid=50618873... 0.05 OrthoFinder output from all 47 species
Ceric.27G016900.1 Ceric.27G016900 regulatory protein *(VQ) of WRKY activity & original... 0.03 OrthoFinder output from all 47 species
Pir_g05905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000599 No alias not classified & original description: CDS=1-1671 0.03 OrthoFinder output from all 47 species
Spa_g11177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 116 137
No external refs found!