Len_g29743


Description : not classified & original description: none


Gene families : OG0000738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29743

Target Alias Description ECC score Gene Family Method Actions
Als_g21327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10833.t1 Aspi01Gene10833 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G019400.1 Ceric.24G019400 not classified & original description: pacid=50628467... 0.02 OrthoFinder output from all 47 species
GSVIVT01012735001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037646001 No alias Uncharacterized protein At5g41620 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os07g12920.1 LOC_Os07g12920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g03367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_76549g0010 No alias Uncharacterized protein At5g41620 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g00182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003714 No alias not classified & original description: CDS=1-960 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017243 No alias not classified & original description: CDS=1-1026 0.03 OrthoFinder output from all 47 species
Solyc08g081830.3.1 Solyc08g081830 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g01186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024800_P004 Zm00001e024800 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039960_P001 Zm00001e039960 Uncharacterized protein At5g41620 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!