Len_g29333 (GH9C2, AtGH9C2)

Aliases : GH9C2, AtGH9C2

Description : not classified & original description: none

Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g29333

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00234390	AtGH9A4, GH9A4,...	Endoglucanase 16 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT1G75680	AtGH9B7, GH9B7	glycosyl hydrolase 9B7	0.03	OrthoFinder output from all 47 species
AT2G44560	GH9B11, AtGH9B11	glycosyl hydrolase 9B11	0.03	OrthoFinder output from all 47 species
Aob_g07273	AtGH9B7, GH9B7	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g62195	GH9C2, AtGH9C2	class-C endo-1,4-beta-glucanase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63529	GH9C2, AtGH9C2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g110340.4.1	GH9B18,...	Endoglucanase 24 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e015739_P002	CEL1, GH9B1,...	Endoglucanase 6 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001701	Glyco_hydro_9	117	176
IPR001701	Glyco_hydro_9	7	104

External Links

No external refs found!