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  5. Len_g28230

Len_g28230


Description : not classified & original description: none


Gene families : OG0008510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008510_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28230

Target Alias Description ECC score Gene Family Method Actions
Ala_g21888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 416 464
IPR002885 Pentatricopeptide_repeat 575 619
IPR002885 Pentatricopeptide_repeat 511 549
IPR002885 Pentatricopeptide_repeat 653 675
No external refs found!