Aliases : SCC2, ATSCC2, EMB2773
Description : adherin *(SCC2) & original description: none
Gene families : OG0005074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00110p00053630 | SCC2, ATSCC2,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
AT5G15540 | SCC2, ATSCC2, EMB2773 | PHD finger family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g086269 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g04894 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g16239 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g08111 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.14G000800.1 | SCC2, ATSCC2,... | adherin *(SCC2) & original description: pacid=50634323... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g39401 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011514001 | SCC2, ATSCC2, EMB2773 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05661 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05042 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10437214g0020 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.04 | OrthoFinder output from all 47 species | |
Ore_g28888 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g08021 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g05355 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g26001 | No alias | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g48907 | No alias | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo440913 | SCC2, ATSCC2, EMB2773 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g05250 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011569_P001 | SCC2, ATSCC2,... | adherin (SCC2) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032695_P001 | SCC2, ATSCC2,... | adherin (SCC2) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006302 | double-strand break repair | IEP | HCCA |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016571 | histone methylation | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |