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  5. Len_g23868

Len_g23868 (AtTMN7, TMN7)


Aliases : AtTMN7, TMN7

Description : not classified & original description: none


Gene families : OG0001040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23868

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00212630 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G24170 No alias Endomembrane protein 70 protein family 0.02 OrthoFinder output from all 47 species
AT3G13772 AtTMN7, TMN7 transmembrane nine 7 0.02 OrthoFinder output from all 47 species
AT5G10840 No alias Endomembrane protein 70 protein family 0.05 OrthoFinder output from all 47 species
Adi_g024073 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09121 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02061 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39183 AtTMN7, TMN7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03308 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03456 AtTMN7, TMN7 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g04390 AtTMN7, TMN7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0065.g035969 AtTMN7, TMN7 not classified & original description: CDS=284-2212 0.04 OrthoFinder output from all 47 species
Ceric.31G017400.1 AtTMN7, TMN7,... not classified & original description: pacid=50574278... 0.05 OrthoFinder output from all 47 species
Ceric.35G001000.1 AtTMN7, TMN7,... not classified & original description: pacid=50580768... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.11 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre10.g439850 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g24214 AtTMN7, TMN7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09919 AtTMN7, TMN7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23244 AtTMN7, TMN7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016851001 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01035970001 No alias Transmembrane 9 superfamily member 9 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_26109 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os09g38530.1 LOC_Os09g38530 Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g03306 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_177756g0010 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_83018g0010 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_83018g0020 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp4g15200.1 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Nbi_g06213 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15555 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08381 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02279 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04770 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g07281 AtTMN7, TMN7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06427 AtTMN7, TMN7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011351 AtTMN7, TMN7 not classified & original description: CDS=188-2113 0.03 OrthoFinder output from all 47 species
Smo165859 AtTMN7, TMN7 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc05g018870.3.1 AtTMN7, TMN7,... Transmembrane 9 superfamily member 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc07g005600.4.1 Solyc07g005600 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g15974 AtTMN7, TMN7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25885 AtTMN7, TMN7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12329 AtTMN7, TMN7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e034890_P002 Zm00001e034890 Transmembrane 9 superfamily member 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039875_P001 Zm00001e039875 Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 57 598
No external refs found!