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  5. Len_g23586

Len_g23586 (SPPA1, SPPA)


Aliases : SPPA1, SPPA

Description : plastidial protease *(SppA) & original description: none


Gene families : OG0003669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003669_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23586

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260630 SPPA1, SPPA,... Protein degradation.peptidase families.serine-type... 0.06 OrthoFinder output from all 47 species
Aev_g10536 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17029 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.54 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Dcu_g07614 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008179001 SPPA1, SPPA Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Gb_05224 SPPA1, SPPA plastidial protease (SppA) 0.03 OrthoFinder output from all 47 species
Nbi_g03780 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06891 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31090 SPPA1, SPPA plastidial protease *(SppA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19405 No alias plastidial protease *(SppA) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023452_P001 SPPA1, SPPA,... plastidial protease (SppA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002142 Peptidase_S49 464 614
IPR002142 Peptidase_S49 226 365
No external refs found!