Len_g21873


Description : subunit delta of cargo adaptor F-subcomplex & original description: none


Gene families : OG0002181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21873

Target Alias Description ECC score Gene Family Method Actions
Adi_g023116 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.09 OrthoFinder output from all 47 species
Adi_g054760 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Adi_g059079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088072 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ala_g38100 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Als_g27387 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Als_g32030 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Aob_g05952 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Aop_g08892 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008406 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034554 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ceric.32G009500.1 Ceric.32G009500 subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Cre02.g089100 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dac_g03342 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Dcu_g08853 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Ehy_g01445 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01012108001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
LOC_Os05g24601.1 LOC_Os05g24601 subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Lfl_g01632 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
MA_7657529g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Mp3g04840.1 No alias subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Msp_g01169 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Nbi_g09025 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Ore_g08393 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Pir_g02815 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Ppi_g05201 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Solyc01g103480.3.1 Solyc01g103480 subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Spa_g05208 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Spa_g26901 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Tin_g08212 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.07 OrthoFinder output from all 47 species
Zm00001e018368_P003 Zm00001e018368 subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Zm00001e039766_P001 Zm00001e039766 subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 281 492
IPR022775 AP_mu_sigma_su 8 134
No external refs found!