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  5. Len_g21621

Len_g21621 (BIM2)


Aliases : BIM2

Description : bHLH-type transcription factor & original description: none


Gene families : OG0002413 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21621

Target Alias Description ECC score Gene Family Method Actions
Aev_g08129 BIM1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09580 BIM2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51145 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52089 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24314.t1 BIM2, Aspi01Gene24314 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14580 BIM2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23831 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g29930.1 BIM2, LOC_Os09g29930 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g34690 BIM1 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26053 BIM1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034451_P006 BIM2, Zm00001e034451 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 216 264
No external refs found!