1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g20544

Len_g20544


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20544
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00255390 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Aev_g01107 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06257 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05170 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08697 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30788 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14784 No alias solute transporter *(AAAP) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21546 No alias solute transporter *(AAAP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032724001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09810.1 LOC_Os02g09810 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g49510.1 LOC_Os02g49510 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Msp_g10610 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025323 No alias not classified & original description: CDS=1-897 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025431 No alias solute transporter *(AAAP) & original description: CDS=1-1404 0.03 OrthoFinder output from all 47 species
Sam_g10068 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089400.4.1 Solyc02g089400 solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Solyc05g052300.4.1 Solyc05g052300 solute transporter (AAAP) 0.01 OrthoFinder output from all 47 species
Spa_g09581 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 36 438
No external refs found!