Len_g20076 (WRKY28, ATWRKY28)

Aliases : WRKY28, ATWRKY28

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g20076
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00102530	WRKY33,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00065p00201230	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.03	OrthoFinder output from all 47 species
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.03	OrthoFinder output from all 47 species
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.03	OrthoFinder output from all 47 species
AT2G44745	No alias	WRKY family transcription factor	0.04	OrthoFinder output from all 47 species
AT5G07100	WRKY26	WRKY DNA-binding protein 26	0.03	OrthoFinder output from all 47 species
Adi_g029222	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g30573	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g32030	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g20798	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g24152	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g37985	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g39118	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g39192	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g48769	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g14799	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g69727	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene23582.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52920.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene63359.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65370.t1	WRKY75,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene66845.t2	WRKY42,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0557.g076884	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: CDS=1-963	0.03	OrthoFinder output from all 47 species
Cba_g61706	WRKY4	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.08G068500.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.25G001000.1	ATWRKY24,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.27G017800.1	WRKY42,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g32055	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g24199	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g11334	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g23435	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03251	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03867	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06063	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06101	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g09114	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09836	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10883	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12121	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13568	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g19263	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26902	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01012196001	ATWRKY57, WRKY57	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01021397001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01022259001	ATWRKY13, WRKY13	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01025562001	WRKY44, TTG2,...	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01029688001	WRKY9, ATWRKY9	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01033195001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01035884001	WRKY18, ATWRKY18	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
LOC_Os01g18584.1	AtWRKY47,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g55080.1	ATWRKY57,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g25770.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os06g06360.1	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os07g48260.1	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os08g29660.1	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os12g02420.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g07502	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g24750	AtWRKY41, WRKY41	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10434450g0010	WRKY49, ATWRKY49	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
MA_114377g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_126273g0010	ATWRKY57, WRKY57	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_133396g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_164675g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_2290g0010	ATWRKY30, WRKY30	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_740729g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_76002g0010	No alias	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g19074	ATWRKY51, WRKY51	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g11115	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g04293	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g27458	WRKY33, ATWRKY33	transcription factor *(WRKY33) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g59259	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g22356	ATWRKY57, WRKY57	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32579	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63321	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g34694	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Smo29146	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Solyc06g070990.3.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g16109	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g22580	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55223	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e002034_P001	ATWRKY58,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e005732_P002	ATWRKY57,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e016622_P001	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e019446_P001	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e020279_P001	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e025443_P001	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e032444_P001	ATWRKY71,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e038239_P001	WRKY46,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	369	425

External Links

No external refs found!

Len_g20076 (WRKY28, ATWRKY28)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation