Len_g19024 (AtCESA1, RSW1, CESA1)

Aliases : AtCESA1, RSW1, CESA1

Description : catalytic component *(CesA) of cellulose synthase complex & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g19024
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00246190	CSLD1, ATCSLD1,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.02	OrthoFinder output from all 47 species
AMTR_s00022p00129900	ATCSLD4, CSLD4,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.02	OrthoFinder output from all 47 species
AMTR_s00067p00196920	CESA4, NWS2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
AMTR_s00137p00043990	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
AT4G18780	CESA8, LEW2,...	cellulose synthase family protein	0.03	OrthoFinder output from all 47 species
AT4G32410	AtCESA1, RSW1, CESA1	cellulose synthase 1	0.04	OrthoFinder output from all 47 species
AT5G05170	IXR1, CEV1,...	Cellulose synthase family protein	0.04	OrthoFinder output from all 47 species
AT5G17420	MUR10, ATCESA7,...	Cellulose synthase family protein	0.03	OrthoFinder output from all 47 species
AT5G44030	CESA4, NWS2, IRX5	cellulose synthase A4	0.03	OrthoFinder output from all 47 species
AT5G64740	CESA6, PRC1, IXR2, E112	cellulose synthase 6	0.04	OrthoFinder output from all 47 species
Adi_g057685	MUR10, ATCESA7,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082474	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aev_g13769	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aev_g29681	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ala_g17663	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Als_g30902	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Als_g48740	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Als_g50501	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aob_g27305	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aob_g30203	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aop_g23682	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aspi01Gene17408.t1	ATH-A, CESA2,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Azfi_s0004.g008840	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: CDS=44-3832	0.03	OrthoFinder output from all 47 species
Azfi_s0095.g043662	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Azfi_s1123.g097771	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: CDS=1-3714	0.03	OrthoFinder output from all 47 species
Cba_g07717	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Dac_g14092	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dac_g34792	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Dcu_g08978	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dcu_g13415	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.05	OrthoFinder output from all 47 species
Dcu_g38706	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.06	OrthoFinder output from all 47 species
Dcu_g47946	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g06173	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g23161	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
GSVIVT01006761001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
GSVIVT01021248001	CESA8, LEW2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01023643001	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01028402001	CESA4, NWS2, IRX5	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01030467001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
GSVIVT01032096001	IXR1, CEV1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01033297001	IXR1, CEV1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01035830001	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
Gb_05828	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Gb_06082	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 9 [UDP-forming]...	0.03	OrthoFinder output from all 47 species
Gb_07444	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Gb_25795	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Gb_32651	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
LOC_Os03g59340.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os03g62090.1	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.06	OrthoFinder output from all 47 species
LOC_Os05g08370.1	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os07g10770.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
LOC_Os07g14850.1	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os07g36630.1	ATCSLD5, CSLD5,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
Lfl_g08211	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Lfl_g10118	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
MA_10429177g0010	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
MA_10435322g0010	AtCESA1, RSW1, CESA1	Probable cellulose synthase A catalytic subunit 2...	0.03	OrthoFinder output from all 47 species
MA_183130g0010	CESA4, NWS2, IRX5	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
MA_717778g0010	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.04	OrthoFinder output from all 47 species
MA_8061832g0010	CESA4, NWS2, IRX5	Cellulose synthase A catalytic subunit 4 [UDP-forming]...	0.02	OrthoFinder output from all 47 species
Mp7g07800.1	AtCESA1, RSW1, CESA1	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Nbi_g04442	CESA6, PRC1, IXR2, E112	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Nbi_g10184	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Nbi_g25978	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Ore_g16667	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Pir_g02585	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Pnu_g27759	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c15_7120V3.1	IXR1, CEV1,...	Cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
Ppi_g03993	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ppi_g10495	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g22252	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ppi_g30689	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Smo75715	ATH-A, CESA2, ATCESA2	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	OrthoFinder output from all 47 species
Smo85326	ATCSLD3, KJK, CSLD3	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
Solyc01g087210.3.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Solyc04g071650.4.1	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.04	OrthoFinder output from all 47 species
Solyc08g061100.3.1	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Spa_g51152	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e009570_P001	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e009592_P002	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e016747_P001	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e026711_P001	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e031187_P001	AtCESA1, RSW1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e037551_P002	CESA5, Zm00001e037551	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	HCCA
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	HCCA
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
CC	GO:0008250	oligosaccharyltransferase complex	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027934	CES_Znf_RING	28	105
IPR005150	Cellulose_synth	357	1073

External Links

No external refs found!

Len_g19024 (AtCESA1, RSW1, CESA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation