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  5. Len_g18915

Len_g18915


Description : AHL clade-B transcription factor & original description: none


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g18915

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00224930 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G63470 No alias AT hook motif DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT1G63480 No alias AT hook motif DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT2G33620 No alias AT hook motif DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Als_g12528 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24172 ATAHL1, AHL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013200001 No alias AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026888001 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g57820.1 LOC_Os02g57820 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g05200.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g06468 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434727g0010 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Ppi_g01003 No alias AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05787 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091370.4.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g55077 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024390_P002 Zm00001e024390 AT-hook motif nuclear-localized protein 10... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 247 360
IPR017956 AT_hook_DNA-bd_motif 194 205
No external refs found!