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  5. Len_g14600

Len_g14600 (HCF106)


Aliases : HCF106

Description : component *(cpTatB) of thylakoid membrane Tat translocation system & original description: none


Gene families : OG0005619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00224110 HCF106,... Protein translocation.chloroplast.thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Adi_g013959 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Cre08.g371650 HCF106 Protein translocation.chloroplast.thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
Dcu_g00674 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.05 OrthoFinder output from all 47 species
GSVIVT01028894001 HCF106 Protein translocation.chloroplast.thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
LOC_Os11g37130.1 HCF106, LOC_Os11g37130 HCF106 protein involved in PS-II assembly. component... 0.02 OrthoFinder output from all 47 species
Lfl_g30372 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Mp8g12830.1 HCF106 HCF106 protein involved in PS-II assembly. component... 0.04 OrthoFinder output from all 47 species
Nbi_g13630 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Pir_g11584 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Pnu_g25885 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004868 HCF106 component *(cpTatB) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Zm00001e008326_P002 HCF106, Zm00001e008326 HCF106 protein involved in PS-II assembly. component... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003369 TatA/B/E 145 191
No external refs found!