Len_g14349


Description : nucleocytoplasmic import karyopherin *(IMB4) & original description: none


Gene families : OG0005260 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005260_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14349

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00059110 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
AT4G27640 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g03927 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Als_g05135 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04972 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01022879001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Lfl_g10041 No alias nucleocytoplasmic import karyopherin *(IMB4) & original... 0.03 OrthoFinder output from all 47 species
MA_10061366g0010 No alias IMB4 nucleocytoplasmic import karyopherin 0.06 OrthoFinder output from all 47 species
MA_10435245g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e001127_P004 Zm00001e001127 IMB4 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0031267 small GTPase binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 23 86
No external refs found!