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Aliases : HCF136
Description : protein involved in PS-II assembly *(HCF136) & original description: none
Gene families : OG0006586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006586_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g11400 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00083110 | HCF136,... | Photosynthesis.photophosphorylation.photosystem... | 0.09 | OrthoFinder output from all 47 species | |
| AT5G23120 | HCF136 | photosystem II stability/assembly factor, chloroplast (HCF136) | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g023753 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g35613 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ala_g31805 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Als_g23347 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g06472 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g09964 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Aspi01Gene72238.t1 | HCF136, Aspi01Gene72238 | protein involved in PS-II assembly *(HCF136) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012492 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19514 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.10G037400.1 | HCF136, Ceric.10G037400 | protein involved in PS-II assembly *(HCF136) & original... | 0.14 | OrthoFinder output from all 47 species | |
| Cre06.g273700 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14607 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g01147 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g00586 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g20509 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01012045001 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.13 | OrthoFinder output from all 47 species | |
| Gb_03750 | HCF136 | HCF136 protein involved in PS-II assembly | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g02953 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.11 | OrthoFinder output from all 47 species | |
| MA_10433328g0010 | HCF136 | HCF136 protein involved in PS-II assembly | 0.11 | OrthoFinder output from all 47 species | |
| Mp4g23900.1 | HCF136 | HCF136 protein involved in PS-II assembly | 0.18 | OrthoFinder output from all 47 species | |
| Msp_g03512 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Nbi_g14696 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g40589 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Pir_g10204 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.12 | OrthoFinder output from all 47 species | |
| Pnu_g05859 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g00841 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009047 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Sam_g07654 | No alias | protein involved in PS-II assembly *(HCF136) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Smo227615 | HCF136 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g014150.4.1 | HCF136, Solyc02g014150 | HCF136 protein involved in PS-II assembly | 0.13 | OrthoFinder output from all 47 species | |
| Spa_g12995 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g11749 | HCF136 | protein involved in PS-II assembly *(HCF136) & original... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e030125_P002 | HCF136, Zm00001e030125 | HCF136 protein involved in PS-II assembly | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015252 | proton channel activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028203 | PSII_CF48-like_dom | 120 | 440 |
| No external refs found! |