Len_g10943 (ATERF12, ERF12)

Aliases : ATERF12, ERF12

Description : subgroup ERF-VIII transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g10943

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00185480	ERF-1, ATERF-1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT2G33710	No alias	Integrase-type DNA-binding superfamily protein	0.05	OrthoFinder output from all 47 species
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.03	OrthoFinder output from all 47 species
AT5G19790	RAP2.11	related to AP2 11	0.02	OrthoFinder output from all 47 species
Aob_g04287	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aop_g13135	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene08500.t1	ATERF3, ERF3,...	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g07845	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Ceric.28G005200.1	DEAR1, CEJ1,...	subgroup ERF-II transcription factor *(ERF19/20) &...	0.04	OrthoFinder output from all 47 species
Dde_g12764	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01021060001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01022109001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01035911001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Lfl_g06043	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_411387g0010	ERF2, ATERF2, ATERF-2	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Mp6g08690.1	TINY2	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Mp6g18650.1	RAP2.11	transcription factor (ERF). transcription factor (ERN1)	0.02	OrthoFinder output from all 47 species
Nbi_g11606	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ore_g33732	RAP2.11	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44016	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g25028	No alias	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g37613	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g53948	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g080910.1.1	Solyc04g080910	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Solyc05g051180.3.1	ERF1, ATERF1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc06g035700.1.1	Solyc06g035700	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Solyc08g007840.3.1	Solyc08g007840	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Solyc09g066350.1.1	Solyc09g066350	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Solyc09g089930.3.1	ERF1, ATERF1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc10g050970.1.1	RRTF1, Solyc10g050970	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc11g042560.1.1	Solyc11g042560	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Spa_g32809	ERF110	subgroup ERF-X transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03837	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Zm00001e006692_P001	Zm00001e006692	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e033790_P001	Zm00001e033790	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	12	61

External Links

No external refs found!

Len_g10943 (ATERF12, ERF12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation