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  5. Len_g10352

Len_g10352


Description : circadian clock transcriptional co-activator *(LNK) & original description: none


Gene families : OG0003774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10352

Target Alias Description ECC score Gene Family Method Actions
Aev_g13753 No alias circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species
Als_g16387 No alias circadian clock transcriptional co-activator *(LNK) &... 0.05 OrthoFinder output from all 47 species
Ceric.19G049900.1 Ceric.19G049900 circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g31360.2 LOC_Os01g31360 LNK circadian clock transcriptional co-activator 0.03 OrthoFinder output from all 47 species
Mp1g10620.1 No alias LNK circadian clock transcriptional co-activator 0.02 OrthoFinder output from all 47 species
Msp_g15350 No alias circadian clock transcriptional co-activator *(LNK) &... 0.04 OrthoFinder output from all 47 species
Nbi_g07168 No alias circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species
Pir_g07135 No alias circadian clock transcriptional co-activator *(LNK) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033573 high-affinity iron permease complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905862 ferroxidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!