Aliases : RPL12-C
Description : component *(bL12c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0004015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004015_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00036p00109340 | RPL12-A, RPL12,... | Protein biosynthesis.organelle translation... | 0.09 | OrthoFinder output from all 47 species | |
AT3G27830 | RPL12-A, RPL12 | ribosomal protein L12-A | 0.04 | OrthoFinder output from all 47 species | |
AT3G27850 | RPL12-C | ribosomal protein L12-C | 0.05 | OrthoFinder output from all 47 species | |
Adi_g010756 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g079765 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g093858 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g46439 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g28151 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Als_g10576 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
Als_g18386 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Als_g26767 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Aop_g05079 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
Azfi_s0003.g007798 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.11G086700.1 | RPL12-C, Ceric.11G086700 | component *(bL12c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.23G047100.1 | RPL12-A, RPL12,... | component *(bL12c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Cre13.g581650 | No alias | Protein biosynthesis.organelle translation... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g04548 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
Dcu_g09157 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g15795 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
Dcu_g41604 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g20806 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Gb_05150 | RPL12-C | component psRPL12 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g47330.1 | RPL12-C, LOC_Os01g47330 | component psRPL12 of large ribosomal subunit proteome | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g49320.1 | RPL12-C, LOC_Os05g49320 | component psRPL12 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
Len_g17443 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Mp5g15720.1 | RPL12-C | component psRPL12 of large ribosomal subunit proteome | 0.12 | OrthoFinder output from all 47 species | |
Msp_g09960 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g08072 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Ore_g01687 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g06697 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g06429 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.12 | OrthoFinder output from all 47 species | |
Pp3c4_24130V3.1 | RPL12-A, RPL12,... | ribosomal protein L12-C | 0.05 | OrthoFinder output from all 47 species | |
Pp3c5_2700V3.1 | RPL12-C, Pp3c5_2700 | ribosomal protein L12-C | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g61935 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0097.g019415 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g51250 | No alias | component *(bL12c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
Solyc02g086730.3.1 | RPL12-C, Solyc02g086730 | component psRPL12 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g086740.1.1 | RPL12-C, Solyc02g086740 | component psRPL12 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
Spa_g08718 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Spa_g56005 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g00273 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
Zm00001e020247_P001 | RPL12-C, Zm00001e020247 | component psRPL12 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028001_P001 | RPL12-C, Zm00001e028001 | component psRPL12 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No external refs found! |