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  5. Len_g09873

Len_g09873 (TIC20)


Aliases : TIC20

Description : component *(Tic20-I/IV) of inner envelope TIC-20 complex & original description: none


Gene families : OG0005319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09873
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Aob_g06310 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.02 OrthoFinder output from all 47 species
Cre08.g379650 TIC20 Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Mp3g05820.1 TIC20 component Tic20-I/IV of inner envelope TIC-20 complex 0.01 OrthoFinder output from all 47 species
Sam_g38196 No alias component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
Solyc05g054720.3.1 TIC20, Solyc05g054720 component Tic20-I/IV of inner envelope TIC-20 complex 0.02 OrthoFinder output from all 47 species
Spa_g06282 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.08 OrthoFinder output from all 47 species
Spa_g06283 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.08 OrthoFinder output from all 47 species
Spa_g29705 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 86 258
No external refs found!