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  5. Len_g09758

Len_g09758


Description : regulatory protein *(ASPM) of microtubule minus-end stability & original description: none


Gene families : OG0007675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09758
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00143230 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00062p00144520 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AT4G21820 No alias binding;calmodulin binding 0.11 OrthoFinder output from all 47 species
Aop_g05233 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.12 OrthoFinder output from all 47 species
Aspi01Gene14455.t1 Aspi01Gene14455 regulatory protein *(ASPM) of microtubule minus-end... 0.06 OrthoFinder output from all 47 species
Azfi_s0004.g008280 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.06 OrthoFinder output from all 47 species
Ceric.23G023300.1 Ceric.23G023300 regulatory protein *(ASPM) of microtubule minus-end... 0.16 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001335.3 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre06.g281200 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g09930 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.14 OrthoFinder output from all 47 species
GSVIVT01002377001 No alias No description available 0.1 OrthoFinder output from all 47 species
Gb_33771 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_33772 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g33370.1 LOC_Os07g33370 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_10431293g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Mp1g06540.1 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Msp_g38961 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.1 OrthoFinder output from all 47 species
Nbi_g08418 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.16 OrthoFinder output from all 47 species
Ppi_g30759 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006557 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.03 OrthoFinder output from all 47 species
Smo419634 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc02g080400.3.1 Solyc02g080400 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g42097 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.09 OrthoFinder output from all 47 species
Tin_g13979 No alias regulatory protein *(ASPM) of microtubule minus-end... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 931 951
IPR000048 IQ_motif_EF-hand-BS 1094 1113
IPR000048 IQ_motif_EF-hand-BS 978 996
IPR000048 IQ_motif_EF-hand-BS 1410 1426
IPR000048 IQ_motif_EF-hand-BS 1280 1296
IPR000048 IQ_motif_EF-hand-BS 1436 1452
IPR000048 IQ_motif_EF-hand-BS 1000 1018
IPR000048 IQ_motif_EF-hand-BS 1048 1067
IPR000048 IQ_motif_EF-hand-BS 910 927
IPR000048 IQ_motif_EF-hand-BS 1188 1206
IPR000048 IQ_motif_EF-hand-BS 852 870
IPR000048 IQ_motif_EF-hand-BS 1024 1040
IPR001715 CH_dom 502 594
IPR001715 CH_dom 631 757
No external refs found!