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  5. Len_g08343

Len_g08343


Description : component *(NUF2) of NDC80 outer kinetochore complex & original description: none


Gene families : OG0006515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08343

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00016840 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromosome... 0.03 OrthoFinder output from all 47 species
Ceric.38G047400.1 Ceric.38G047400 component *(NUF2) of NDC80 outer kinetochore complex &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.65 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
Cre01.g008450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 OrthoFinder output from all 47 species
Gb_15278 No alias component NUF2 of NDC80 outer kinetochore complex 0.04 OrthoFinder output from all 47 species
MA_66453g0010 No alias component NUF2 of NDC80 outer kinetochore complex 0.03 OrthoFinder output from all 47 species
Mp3g15760.1 No alias component NUF2 of NDC80 outer kinetochore complex 0.05 OrthoFinder output from all 47 species
Ppi_g02000 No alias component *(NUF2) of NDC80 outer kinetochore complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e006361_P001 Zm00001e006361 component NUF2 of NDC80 outer kinetochore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEA Interproscan
CC GO:0031262 Ndc80 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005549 Kinetochore_Nuf2_N 11 147
No external refs found!