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  5. Len_g08306

Len_g08306


Description : not classified & original description: none


Gene families : OG0001646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08306

Target Alias Description ECC score Gene Family Method Actions
Adi_g019581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23912 XRI1, XRI not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g00580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04255 XRI1, XRI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00492 XRI1, XRI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58363.t1 Aspi01Gene58363 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17648 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G055700.1 Ceric.15G055700 not classified & original description: pacid=50640375... 0.03 OrthoFinder output from all 47 species
Ceric.39G003700.1 XRI1, XRI,... not classified & original description: pacid=50582772... 0.04 OrthoFinder output from all 47 species
Dac_g07426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22087 XRI1, XRI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16422 XRI1, XRI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02911 XRI1, XRI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g19714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28906 XRI1, XRI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018845_P003 XRI1, XRI, Zm00001e018845 Protein XRI1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e023784_P001 Zm00001e023784 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!