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  5. Len_g07771

Len_g07771


Description : not classified & original description: none


Gene families : OG0009715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009715_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07771

Target Alias Description ECC score Gene Family Method Actions
Als_g22424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G008800.1 Ceric.33G008800 not classified & original description: pacid=50606874... 0.03 OrthoFinder output from all 47 species
Ppi_g32329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 183 207
IPR002885 Pentatricopeptide_repeat 459 486
IPR002885 Pentatricopeptide_repeat 426 445
IPR002885 Pentatricopeptide_repeat 493 522
IPR002885 Pentatricopeptide_repeat 392 416
IPR002885 Pentatricopeptide_repeat 216 243
IPR002885 Pentatricopeptide_repeat 314 352
IPR002885 Pentatricopeptide_repeat 627 676
IPR002885 Pentatricopeptide_repeat 247 296
IPR002885 Pentatricopeptide_repeat 558 606
IPR002885 Pentatricopeptide_repeat 114 159
No external refs found!