Len_g07419 (GCH, ATGCH, RFD1, ATRIBA1)

Aliases : GCH, ATGCH, RFD1, ATRIBA1

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none

Gene families : OG0001684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001684_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g07419
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00145p00064330	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase...	0.03	OrthoFinder output from all 47 species
AT5G59750	No alias	DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II	0.02	OrthoFinder output from all 47 species
Ala_g14925	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.04	OrthoFinder output from all 47 species
Azfi_s0001.g000888	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
Cre14.g620350	GCH, ATGCH, RFD1, ATRIBA1	Probable bifunctional riboflavin biosynthesis protein...	0.01	OrthoFinder output from all 47 species
Dac_g12652	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.03	OrthoFinder output from all 47 species
LOC_Os08g37605.1	GCH, ATGCH,...	bifunctional GTP cyclohydrolase II (RibA) and DHBP...	0.03	OrthoFinder output from all 47 species
Ppi_g17162	GCH, ATGCH, RFD1, ATRIBA1	EC_3.5 hydrolase acting on carbon-nitrogen bond, other...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006771	riboflavin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009231	riboflavin biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042726	flavin-containing compound metabolic process	None	Extended
BP	GO:0042727	flavin-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000422	DHBP_synthase_RibB	149	342
IPR032677	GTP_cyclohydro_II	353	518

External Links

No external refs found!

Len_g07419 (GCH, ATGCH, RFD1, ATRIBA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation