1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g05278

Len_g05278 (ATBPM2, BPM2)


Aliases : ATBPM2, BPM2

Description : substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase complex & original description: none


Gene families : OG0000564 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000564_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05278

Target Alias Description ECC score Gene Family Method Actions
Ceric.12G071100.1 ATBPM2, BPM2,... substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.26G031100.1 BPM4, ATBPM4,... not classified & original description: pacid=50599500... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.65 BPM6, ATBPM6 No description available 0.01 OrthoFinder output from all 47 species
LOC_Os07g01140.1 ATBPM3, BPM3,... BTB/POZ and MATH domain-containing protein 3... 0.03 OrthoFinder output from all 47 species
MA_17704g0010 BPM4, ATBPM4 BTB/POZ and MATH domain-containing protein 4... 0.03 OrthoFinder output from all 47 species
Mp7g17300.1 ATBPM2, BPM2 BTB/POZ and MATH domain-containing protein 2... 0.02 OrthoFinder output from all 47 species
Pir_g57067 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc09g072980.2.1 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 2... 0.02 OrthoFinder output from all 47 species
Tin_g00915 ATBPM2, BPM2 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Tin_g06545 BPM4, ATBPM4 substrate adaptor *(BPM) of CUL3-BTB E3 ubiquiTin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e004738_P003 ATBPM2, BPM2,... BTB/POZ and MATH domain-containing protein 3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 52 167
IPR000210 BTB/POZ_dom 194 308
No external refs found!