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  5. Len_g05004

Len_g05004 (ATFD3, FD3)


Aliases : ATFD3, FD3

Description : ferredoxin targeted to NADP reduction & original description: none


Gene families : OG0000635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05004
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G60950 FED A, ATFD2 2Fe-2S ferredoxin-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g01896 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Aob_g32125 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Aop_g05087 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G078000.1 FD1, ATFD1,... ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Cre14.g626700 FD1, ATFD1 Photosynthesis.photophosphorylation.linear electron... 0.01 OrthoFinder output from all 47 species
Dde_g02518 ATFD3, FD3 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Dde_g15503 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ehy_g26325 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33630.1 ATFD3, FD3,... ferredoxin electron carrier 0.02 OrthoFinder output from all 47 species
Lfl_g20268 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Mp2g15250.1 FD1, ATFD1 ferredoxin electron carrier 0.03 OrthoFinder output from all 47 species
Msp_g05782 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Msp_g05813 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Nbi_g18589 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.08 OrthoFinder output from all 47 species
Pir_g11037 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Pir_g16441 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Pp3c4_8330V3.1 FED A, ATFD2, Pp3c4_8330 2Fe-2S ferredoxin-like superfamily protein 0.01 OrthoFinder output from all 47 species
Smo236581 FED A, ATFD2 Photosynthesis.photophosphorylation.linear electron... 0.02 OrthoFinder output from all 47 species
Tin_g21014 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Zm00001e029128_P001 FED A, ATFD2,... ferredoxin electron carrier 0.04 OrthoFinder output from all 47 species
Zm00001e029129_P001 FED A, ATFD2,... ferredoxin electron carrier 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 69 142
No external refs found!