Aliases : PGP20
Description : subfamily ABCB transporter & original description: none
Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00076p00195870 | PGP1, ABCB1,... | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00145p00075460 | PGP20,... | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
AT2G39480 | PGP6 | P-glycoprotein 6 | 0.02 | OrthoFinder output from all 47 species | |
AT3G62150 | PGP21 | P-glycoprotein 21 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g015267 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g019429 | PGP20 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g060981 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g18719 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g21203 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g22635 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g34073 | PGP20 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g02407 | PGP20 | subfamily ABCB transporter & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene20592.t1 | PGP6, Aspi01Gene20592 | subfamily ABCB transporter & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene32170.t1 | ABCB14,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g22175 | PGP20 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g47815 | PGP11 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Dde_g41259 | PGP11 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02960 | PGP13 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g08692 | PGP20 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g20264 | No alias | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g21294 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016617001 | PGP20 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017696001 | PGP11 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Gb_20009 | PGP6 | subfamily ABCB transporter | 0.06 | OrthoFinder output from all 47 species | |
Gb_31652 | PGP6 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Gb_36503 | No alias | serine carboxypeptidase. subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g74470.1 | PGP20, LOC_Os01g74470 | subfamily ABCB transporter | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g09720.1 | LOC_Os02g09720 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g17180.1 | PGP20, LOC_Os03g17180 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
Len_g24509 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g04289 | PGP20 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g27273 | ATPGP4, PGP4, ABCB4, MDR4 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10432922g0010 | No alias | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
MA_6958g0010 | PGP21 | ABC transporter B family member 21 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
Mp2g11920.1 | ABCB19,... | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Msp_g01686 | PGP6 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g02494 | PGP2 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g04029 | PGP11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g26459 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Pir_g65660 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pp3c17_16450V3.1 | ABCB19,... | ATP binding cassette subfamily B19 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0014.g006153 | PGP11 | subfamily ABCB transporter & original description: CDS=261-4235 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0055.g014489 | PGP6 | subfamily ABCB transporter & original description: CDS=1-4245 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0111.g020710 | ABCB19,... | not classified & original description: CDS=1-1380 | 0.02 | OrthoFinder output from all 47 species | |
Smo419451 | No alias | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
Solyc04g010310.4.1 | PGP20, Solyc04g010310 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g072960.1.1 | ABCB14,... | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
Tin_g06138 | PGP6 | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e001258_P003 | PGP20, Zm00001e001258 | subfamily ABCB transporter | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e018488_P001 | PGP20, Zm00001e018488 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041087_P002 | Zm00001e041087 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
No external refs found! |