Len_g04709 (MMP)

Aliases : MMP

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none

Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g04709

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0187.g056745	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.05	OrthoFinder output from all 47 species
Ehy_g30544	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Smo110370	No alias	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder output from all 47 species
Solyc04g005040.1.1	Solyc04g005040	Matrixin-type metalloprotease	0.02	OrthoFinder output from all 47 species
Solyc04g005050.1.1	Solyc04g005050	Matrixin-type metalloprotease	0.02	OrthoFinder output from all 47 species
Tin_g08223	MMP	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.06	OrthoFinder output from all 47 species
Zm00001e015780_P001	MMP, Zm00001e015780	Matrixin-type metalloprotease	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031012	extracellular matrix	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002477	Peptidoglycan-bd-like	68	122
IPR001818	Pept_M10_metallopeptidase	174	333

External Links

No external refs found!