Len_g04568 (ATRNS1, RNS1)

Aliases : ATRNS1, RNS1

Description : T2-type RNase *(RNS) & original description: none

Gene families : OG0001771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001771_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g04568

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g160953	PGP1, ABCB1, ATPGP1	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01010193001	ATRNS1, RNS1	Extracellular ribonuclease LE OS=Solanum lycopersicum	0.03	OrthoFinder output from all 47 species
Gb_30835	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os08g33710.1	RNS3, LOC_Os08g33710	Extracellular ribonuclease LE OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
MA_10433186g0010	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10433186g0020	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_8445917g0010	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_95383g0020	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp2g08570.1	ATRNS1, RNS1	Ribonuclease 1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Ore_g03541	ATRNS1, RNS1	T2-type RNase *(RNS) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30656	ATRNS1, RNS1	T2-type RNase *(RNS) & original description: none	0.02	OrthoFinder output from all 47 species
Smo407198	No alias	No description available	0.02	OrthoFinder output from all 47 species
Solyc07g006560.3.1	Solyc07g006560	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016849	phosphorus-oxygen lyase activity	None	Extended
MF	GO:0033897	ribonuclease T2 activity	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001568	RNase_T2-like	35	216

External Links

No external refs found!