1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g03545

Len_g03545 (RPL16A)


Aliases : RPL16A

Description : component *(uL5) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001936_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03545

Target Alias Description ECC score Gene Family Method Actions
AT4G18730 RPL16B ribosomal protein L16B 0.02 OrthoFinder output from all 47 species
AT5G45775 No alias Ribosomal L5P family protein 0.02 OrthoFinder output from all 47 species
Cre01.g027000 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01020743001 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os01g10820.1 RPL16A, LOC_Os01g10820 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os05g11710.1 RPL16A, LOC_Os05g11710 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os06g35730.1 RPL16A, LOC_Os06g35730 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
MA_86694g0010 RPL16A component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c5_3870V3.1 RPL16A, Pp3c5_3870 Ribosomal L5P family protein 0.02 OrthoFinder output from all 47 species
Pp3c7_20160V3.1 RPL16A, Pp3c7_20160 ribosomal protein large subunit 16A 0.02 OrthoFinder output from all 47 species
Sam_g21398 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo444767 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc02g086240.3.1 RPL16A, Solyc02g086240 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc07g055230.4.1 RPL16A, Solyc07g055230 component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc10g007980.3.1 RPL16A, Solyc10g007980 component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc12g010930.2.1 RPL16A, Solyc12g010930 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e024913_P001 RPL16A, Zm00001e024913 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e026886_P003 RPL16A, Zm00001e026886 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR031310 Ribosomal_L5_N 12 63
IPR031309 Ribosomal_L5_C 67 165
No external refs found!