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  5. Len_g01030

Len_g01030


Description : chalcone isomerase & original description: none


Gene families : OG0002319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01030
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AT5G05270 No alias Chalcone-flavanone isomerase family protein 0.03 OrthoFinder output from all 47 species
Ala_g23437 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37318 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G016600.1 Ceric.09G016600 chalcone isomerase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g11451 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49503 No alias chalcone isomerase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g02028 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032685001 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os11g02440.1 LOC_Os11g02440 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g02370.2 LOC_Os12g02370 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g16352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30159 No alias chalcone isomerase & original description: none 0.06 OrthoFinder output from all 47 species
MA_502949g0010 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp5g01410.1 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g25257 No alias chalcone isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g31384 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08536 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36083 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_25770V3.1 Pp3c4_25770 Chalcone-flavanone isomerase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g38923 No alias chalcone isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g08582 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Smo227414 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g03063 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10892 No alias chalcone isomerase & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 4 208
No external refs found!