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  5. Len_g00742

Len_g00742 (ECT5)


Aliases : ECT5

Description : methylation reader *(ECT) & original description: none


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g00742

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00172900 ECT11,... No description available 0.02 OrthoFinder output from all 47 species
Adi_g018882 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12419 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06040 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18337 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11511 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G060700.1 ECT5, Ceric.05G060700 methylation reader *(ECT) & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g02898 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017649001 ECT7 No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032236001 ECT5 No description available 0.04 OrthoFinder output from all 47 species
MA_10429321g0010 ECT7 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
MA_130754g0010 ECT2 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Ore_g09604 ECT3 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26129 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44203 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19610 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g099090.3.1 ECT7, Solyc12g099090 methylation reader (ECT) 0.04 OrthoFinder output from all 47 species
Spa_g02267 ECT7 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05381 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46273 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040047_P001 ECT5, Zm00001e040047 methylation reader (ECT) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 410 548
No external refs found!