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  5. Nbi_g42088

Nbi_g42088 (AtMAN6, MAN6)


Aliases : AtMAN6, MAN6

Description : endo-beta-1,4-mannanase & original description: none


Gene families : OG0000482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g42088
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00124840 AtMAN6, MAN6,... Cell wall.hemicellulose.heteromannan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00011p00202020 AtMAN7, MAN7,... Cell wall.hemicellulose.heteromannan.modification and... 0.05 OrthoFinder output from all 47 species
AMTR_s00077p00136900 AtMAN6, MAN6,... Cell wall.hemicellulose.heteromannan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00137380 evm_27.TU.AmTr_v1... Putative mannan endo-1,4-beta-mannosidase 5 OS=Oryza... 0.04 OrthoFinder output from all 47 species
AT3G10900 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g17583 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g21874 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g25144 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21043 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g42749 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g48223 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20630 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21914 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G063200.1 AtMAN7, MAN7,... endo-beta-1,4-mannanase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.16G080700.1 AtMAN6, MAN6,... endo-beta-1,4-mannanase & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g02710 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35257 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14371 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g17267 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02538 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030165001 AtMAN6, MAN6 Cell wall.hemicellulose.heteromannan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01037212001 AtMAN7, MAN7 Cell wall.hemicellulose.heteromannan.modification and... 0.07 OrthoFinder output from all 47 species
GSVIVT01037214001 AtMAN7, MAN7 Cell wall.hemicellulose.heteromannan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_08848 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.09 OrthoFinder output from all 47 species
Gb_28909 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.05 OrthoFinder output from all 47 species
Gb_29706 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
Gb_30579 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.04 OrthoFinder output from all 47 species
Len_g16709 MAN2, AtMAN2 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g27216 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.07 OrthoFinder output from all 47 species
Len_g57217 MAN5, AtMAN5 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432193g0010 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.04 OrthoFinder output from all 47 species
MA_110162g0010 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
MA_6558g0010 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
MA_69814g0010 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.03 OrthoFinder output from all 47 species
MA_71720g0010 MAN2, AtMAN2 endo-beta-1,4-mannanase 0.04 OrthoFinder output from all 47 species
MA_8194133g0010 MAN2, AtMAN2 Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_894609g0010 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Mp8g06310.1 AtMAN7, MAN7 endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Mp8g13360.1 AtMAN6, MAN6 endo-beta-1,4-mannanase 0.04 OrthoFinder output from all 47 species
Msp_g32648 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g06873 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15662 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23500 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g14565 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05773 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27403 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.04 OrthoFinder output from all 47 species
Smo101148 MAN5, AtMAN5 Cell wall.hemicellulose.heteromannan.modification and... 0.02 OrthoFinder output from all 47 species
Smo234867 MAN5, AtMAN5 Cell wall.hemicellulose.heteromannan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc07g053920.3.1 MAN2, AtMAN2,... endo-beta-1,4-mannanase 0.02 OrthoFinder output from all 47 species
Solyc10g074920.2.1 AtMAN6, MAN6,... endo-beta-1,4-mannanase 0.04 OrthoFinder output from all 47 species
Spa_g00368 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10298 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47089 AtMAN7, MAN7 endo-beta-1,4-mannanase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01732 AtMAN6, MAN6 endo-beta-1,4-mannanase & original description: none 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0071704 organic substance metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 79 359
No external refs found!