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  5. Nbi_g38205

Nbi_g38205 (GSA2)


Aliases : GSA2

Description : EC_5.4 intramolecular transferase & original description: none


Gene families : OG0004637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38205
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT5G63570 GSA1 glutamate-1-semialdehyde-2,1-aminomutase 0.02 OrthoFinder output from all 47 species
Aev_g07203 GSA2 EC_5.4 intramolecular transferase & original description: none 0.12 OrthoFinder output from all 47 species
Ala_g12607 GSA2 EC_5.4 intramolecular transferase & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g08934 GSA2 EC_5.4 intramolecular transferase & original description: none 0.06 OrthoFinder output from all 47 species
Cre03.g158000 GSA2 Coenzyme metabolism.tetrapyrrol... 0.03 OrthoFinder output from all 47 species
Dcu_g04579 GSA2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008589001 GSA1 Coenzyme metabolism.tetrapyrrol... 0.02 OrthoFinder output from all 47 species
Len_g03262 GSA2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11780 GSA2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01654 GSA2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g17700.1 GSA2 glutamate-1-semialdehyde-2,1-aminomutase 0.04 OrthoFinder output from all 47 species
Ore_g29303 GSA2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09525 GSA2 EC_5.4 intramolecular transferase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02990 GSA2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26959 No alias EC_5.4 intramolecular transferase & original description: none 0.09 OrthoFinder output from all 47 species
Smo183248 GSA2 Coenzyme metabolism.tetrapyrrol... 0.03 OrthoFinder output from all 47 species
Spa_g15993 GSA2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 98 458
No external refs found!