ATMG00090


Description : structural constituent of ribosome;protein binding


Gene families : OG_01_0002822 (Gene family) Phylogenetic Tree(s): OG0002822_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): ATMG00090
Cluster HCCA cluster: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
LOC_Os12g34124 No alias 29.2.1.1.2.1.3 protein.synthesis.ribosomal... 0.03 Gene family
Solyc05g045830.1.1 Solyc05g045830.1 29.2.1.1.2.1.3 protein.synthesis.ribosomal... 0.06 Gene family
Solyc08g045870.2.1 Solyc08g045870.2 29.2.1.1.2.1.3 protein.synthesis.ribosomal... 0.04 Gene family
Solyc09g015850.3.1 Solyc09g015850.3 29.2.1.1.2.1.3 protein.synthesis.ribosomal... 0.12 Gene family
Solyc12g039000.2.1 Solyc12g039000.2 29.2.1.1.2.1.3 protein.synthesis.ribosomal... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome TAS Arabidopsis.org
MF GO:0005515 protein binding IPI Arabidopsis.org
CC GO:0005739 mitochondrion ISM Arabidopsis.org
CC GO:0005763 mitochondrial small ribosomal subunit TAS Arabidopsis.org
BP GO:0006412 translation TAS Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001351 Ribosomal_S3_C 463 539
No external refs found!