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  5. Nbi_g34642

Nbi_g34642


Description : not classified & original description: none


Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34642
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G06430 FTSH8 FTSH protease 8 0.05 OrthoFinder output from all 47 species
Als_g08052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75374 VAR2, FTSH2 EXECUTER-cleavage protease *(FtsH2) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G093200.1 FTSH8, Ceric.03G093200 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Ceric.12G054300.1 Ceric.12G054300 not classified & original description: pacid=50601545... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.74 ATFTSH6, FTSH6 ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.01 OrthoFinder output from all 47 species
Dcu_g12670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g45820.1 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 OrthoFinder output from all 47 species
Lfl_g04989 FTSH8 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Ore_g26838 VAR2, FTSH2 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.02 OrthoFinder output from all 47 species
Solyc03g046340.3.1 Solyc03g046340 component FtsHi of protein translocation ATPase motor complex 0.03 OrthoFinder output from all 47 species
Zm00001e037753_P001 VAR2, FTSH2,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 635 672
IPR003959 ATPase_AAA_core 475 603
No external refs found!