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  5. Nbi_g29087

Nbi_g29087


Description : not classified & original description: none


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29087

Target Alias Description ECC score Gene Family Method Actions
Adi_g118575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00768.t1 Aspi01Gene00768 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01730.t1 Aspi01Gene01730 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01033709001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g38475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo446143 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Spa_g06177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55593 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 10 137
No external refs found!