AT4G17560


Description : Ribosomal protein L19 family protein


Gene families : OG_01_0002139 (Gene family) Phylogenetic Tree(s): OG0002139_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): AT4G17560
Cluster HCCA cluster: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Cre17.g734450 No alias No description available 0.14 Gene family
GSVIVT01002112001 No alias 29.2.1.1.1.2.19 protein.synthesis.ribosomal... 0.17 Gene family
GSVIVT01007636001 No alias 29.2.1.1.3.2.19 protein.synthesis.ribosomal... 0.02 Gene family
LOC_Os02g43600 Os02g0652600 29.2.1.1.1.2.19 protein.synthesis.ribosomal... 0.16 Gene family
MA_947876g0010 No alias 29.2.1.1.1.2.19 protein.synthesis.ribosomal... 0.07 Gene family
Solyc08g078010.3.1 Solyc08g078010.3 29.2.1.1.1.2.19 protein.synthesis.ribosomal... 0.2 Gene family
Zm00001d017449 GRMZM2G171444 29.2.1.1.1.2.19 protein.synthesis.ribosomal... 0.21 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Arabidopsis.org
CC GO:0005840 ribosome ISS Arabidopsis.org
BP GO:0006412 translation ISS Arabidopsis.org
CC GO:0009507 chloroplast IDA Arabidopsis.org
CC GO:0009507 chloroplast ISM Arabidopsis.org
CC GO:0009570 chloroplast stroma IDA Arabidopsis.org
CC GO:0009941 chloroplast envelope IDA Arabidopsis.org
BP GO:0010267 production of ta-siRNAs involved in RNA interference RCA Arabidopsis.org
CC GO:0016020 membrane IDA Arabidopsis.org
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Arabidopsis.org
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA RCA Arabidopsis.org
BP GO:0042254 ribosome biogenesis ISS Arabidopsis.org
BP GO:0051607 defense response to virus RCA Arabidopsis.org
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 124 218
No external refs found!