Aliases : RPS17, CS17, PRPS17
Description : component *(uS17c) of small plastid ribosomal-subunit proteome & original description: none
Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00201470 | RPS17, CS17,... | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
AT1G79850 | RPS17, CS17, PRPS17 | ribosomal protein S17 | 0.07 | OrthoFinder output from all 47 species | |
Adi_g012725 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Ala_g13255 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Als_g47206 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g43549 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene13972.t1 | RPS17, CS17,... | component *(uS17c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0430.g069336 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.11G069100.1 | Ceric.11G069100 | component *(uS17c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Cre02.g118950 | emb1129 | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g17145 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Dde_g25473 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Ehy_g07306 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01017072001 | RPS17, CS17, PRPS17 | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
Gb_07769 | RPS17, CS17, PRPS17 | component psRPS17 of small ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g10801 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
MA_10123473g0010 | RPS17, CS17, PRPS17 | component psRPS17 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
Msp_g12962 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Ore_g06145 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g06274 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Pp3c11_14630V3.1 | RPS17, CS17,... | ribosomal protein S17 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c1_12860V3.1 | RPS17, CS17,... | ribosomal protein S17 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0102.g019876 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g38683 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g47246 | No alias | component *(uS17c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g120630.4.1 | RPS17, CS17,... | component psRPS17 of small ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
Spa_g48114 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g09281 | RPS17, CS17, PRPS17 | component *(uS17c) of small plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Zm00001e028738_P001 | RPS17, CS17,... | component psRPS17 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
BP | GO:0010257 | NADH dehydrogenase complex assembly | IEP | HCCA |
BP | GO:0010258 | NADH dehydrogenase complex (plastoquinone) assembly | IEP | HCCA |
BP | GO:0010275 | NAD(P)H dehydrogenase complex assembly | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034311 | diol metabolic process | IEP | HCCA |
BP | GO:0034312 | diol biosynthetic process | IEP | HCCA |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | HCCA |
BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000266 | Ribosomal_S17/S11 | 8 | 75 |
No external refs found! |